陳啟明
職稱
教授
Office_Hour
（週一）10:00-12:00（週二）13:00-15:00
辦公室電話
02-77496039
E-mail
cchen@phy.ntnu.edu.tw
開放學者平台
https://scholar.lib.ntnu.edu.tw/zh/persons/chi-ming-chen
個人網頁
http://phy.ntnu.edu.tw/~cchen/
最高學歷
美國密西根大學博士
研究領域
  1. 膜蛋白折疊
  2. 神經元網絡同步
  3. 生物膜
  4. 高分子物理
研究專長
  1. 生物物理
  2. 凝體物理

    2025

  1. Mapping cancer heterogeneity: a consensus network approach to subtypes and pathways
    Hu, G. M., Chen, H. W. & Chen, C. M. , 2025 Sept 1 , In: Briefings in Bioinformatics. 26 , 5 , bbaf452.
  2. Phylogenetic network of infectious bronchitis virus: exploring the impact of migratory birds on viral clustering, evolution, and recombination
    Tai, Y. C., Hu, G. M. & Chen, C. M. , 2025 , In: Veterinary Quarterly. 45 , 1 , p. 1-14 14 p.

    3. 2024

  3. Solving puzzles using knowledge-based automation: biomimicry of human solvers
    Fauzia, S., Chen, S., Hsu, R. J., Chen, R. & Chen, C. M. , 2024 Aug , In: Complex and Intelligent Systems. 10 , 4 , p. 5615-5624 10 p.

    4. 2023

  4. Unraveling the evolutionary patterns and phylogenomics of coronaviruses: A consensus network approach
    Hu, G. M., Tai, Y. C. & Chen, C. M. , 2023 Nov , In: Journal of Medical Virology. 95 , 11 , e29233.

    5. 2022

  5. MSClustering: A Cytoscape Tool for Multi-Level Clustering of Biological Networks
    Ge, B. K., Hu, G. M., Chen, R. & Chen, C. M. , 2022 Nov , In: International journal of molecular sciences. 23 , 22 , 14240.

    6. 2021

  6. Plastic bioconversion: Reaction mechanism of PETases
    Ge, B. K., Hu, G. M. & Chen, C. M. , 2021 Oct , In: Chinese Journal of Physics. 73 , p. 331-339 9 p.

    7. 2019

  7. SeQuery: An interactive graph database for visualizing the GPCR superfamily
    Hu, G. M., Secario, M. K. & Chen, C. M. , 2019 , In: Database. 2019 , 1 , baz073.
  8. Unsupervised cluster analyses of character networks in fiction: Community structure and centrality
    Chen, R. H. G., Chen, C. C. & Chen, C. M. , 2019 Jan 1 , In: Knowledge-Based Systems. 163 , p. 800-810 11 p.

    9. 2017

  9. Synchronization and inter-layer interactions of noise-driven neural networks
    Yuniati, A., Mai, T. L. & Chen, C. M. , 2017 Jan 31 , In: Frontiers in Computational Neuroscience. 11 , 2.
  10. Visualizing the GPCR Network: Classification and Evolution
    Hu, G. M., Mai, T. L. & Chen, C. M. , 2017 Dec 1 , In: Scientific reports. 7 , 1 , 15495.

    11. 2016

  11. Visualizing and Clustering Protein Similarity Networks: Sequences, Structures, and Functions
    Mai, T. L., Hu, G. M. & Chen, C. M. , 2016 Jul 1 , In: Journal of Proteome Research. 15 , 7 , p. 2123-2131 9 p.
  12. Visualizing the world's scientific publications
    Chen, R. H. G. & Chen, C. M. , 2016 Oct 1 , In: Journal of the Association for Information Science and Technology. 67 , 10 , p. 2477-2488 12 p.

    13. 2015

  13. Clustering and visualizing similarity networks of membrane proteins
    Hu, G. M., Mai, T. L. & Chen, C. M. , 2015 Aug 1 , In: Proteins: Structure, Function and Bioinformatics. 83 , 8 , p. 1450-1461 12 p.
  14. Visualizing the clustering of financial networks and profitability of stocks
    Chen, C. M. & Chang, Y. F., 2015 Jun 1 , In: Journal of Complex Networks. 3 , 2 , p. 303-318 16 p.

    15. 2014

  15. Computational prediction of kink properties of helices in membrane proteins
    Mai, T. L. & Chen, C. M. , 2014 Feb , In: Journal of Computer-Aided Molecular Design. 28 , 2 , p. 99-109 11 p.

    16. 2012

  16. Monte Carlo simulations of single and coupled synthetic molecular motors
    Chen, C. M. & Zuckermann, M., 2012 Nov 5 , In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 86 , 5 , 051905.
  17. Replica exchange Monte-Carlo simulations of helix bundle membrane proteins: Rotational parameters of helices
    Wu, H. H., Chen, C. C. & Chen, C. M. , 2012 Mar , In: Journal of Computer-Aided Molecular Design. 26 , 3 , p. 363-374 12 p.
  18. Statistical analyses and computational prediction of helical kinks in membrane proteins
    Huang, Y. H. & Chen, C. M. , 2012 Oct , In: Journal of Computer-Aided Molecular Design. 26 , 10 , p. 1171-1185 15 p.

    19. 2011

  19. Classification and visualization of the social science network by the minimum span clustering method
    Chang, Y. F. & Chen, C. M. , 2011 Dec , In: Journal of the American Society for Information Science and Technology. 62 , 12 , p. 2404-2413 10 p.
  20. Synchronization in a noise-driven developing neural network
    Lin, I. H., Wu, R. K. & Chen, C. M. , 2011 Nov 29 , In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 84 , 5 , 051923.

    21. 2009

  21. A dual-scale approach toward structure prediction of retinal proteins
    Chen, C. C. & Chen, C. M. , 2009 Jan , In: Journal of Structural Biology. 165 , 1 , p. 37-46 10 p.
  22. Effects of Si capping layers on the properties of ultrathin Co/Ir(111) films
    Tsay, J. S. , Liou, Y. C., Chen, C. M. & Chan, W. Y., 2009 , In: Journal of Vacuum Science and Technology A: Vacuum, Surfaces and Films. 27 , 6 , p. 1266-1270 5 p.

    23. 2008

  23. Classification of scientific networks using aggregated journal-journal citation relations in the journal citation reports
    Chen, C. M. , 2008 Dec , In: Journal of the American Society for Information Science and Technology. 59 , 14 , p. 2296-2304 9 p.
  24. Packing of transmembrane helices in bacteriorhodopsin folding: Structure and thermodynamics
    Chen, C. C., Wei, C. C., Sun, Y. C. & Chen, C. M. , 2008 May , In: Journal of Structural Biology. 162 , 2 , p. 237-247 11 p.

    25. 2007

  25. Contact-induced structure transformation in transmembrane prion propagation
    Ou, D. M., Chen, C. C. & Chen, C. M. , 2007 Apr , In: Biophysical Journal. 92 , 8 , p. 2704-2710 7 p.
  26. Driven polymer transport through a nanopore controlled by a rotating electric field: Off-lattice computer simulations
    Tsai, Y. S. & Chen, C. M. , 2007 , In: Journal of Chemical Physics. 126 , 14 , 144910.

    27. 2006

  27. Visualizing the scientific world and its evolution
    Samoylenko, I., Chao, T. C., Liu, W. C. & Chen, C. M. , 2006 Sept , In: Journal of the American Society for Information Science and Technology. 57 , 11 , p. 1461-1469 9 p.

    28. 2005

  28. Driven translocation dynamics of polynucleotides through a nanopore: Off-lattice Monte-Carlo simulations
    Chen, C. M. , 2005 May 1 , In: Physica A: Statistical Mechanics and its Applications. 350 , 1 , p. 95-107 13 p.
  29. Learning-induced synchronization and plasticity of a developing neural network
    Chao, T. C. & Chen, C. M. , 2005 Dec , In: Journal of Computational Neuroscience. 19 , 3 , p. 311-324 14 p.

    30. 2003

  30. Computer simulations of membrane protein folding: Structure and dynamics
    Chen, C. M. & Chen, C. C., 2003 Mar 1 , In: Biophysical Journal. 84 , 3 , p. 1902-1908 7 p.
  31. Nanopore sequencing of polynucleotides assisted by a rotating electric field
    Chen, C. M. & Peng, E. H., 2003 Feb 24 , In: Applied Physics Letters. 82 , 8 , p. 1308-1310 3 p.

    32. 2001

  32. Instability of myelin tubes under dehydration: Deswelling of layered cylindrical structures
    Chen, C. M. , Schmidt, C. F., Olmsted, P. D. & MacKintosh, F. C., 2001 Nov , In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64 , 5 , p. 1-4 4 p.
  33. Instability of myelin tubes under dehydration: Deswelling of layered cylindrical structures
    Chen, C. M. , Schmidt, C. F., Olmsted, P. D. & MacKintosh, F. C., 2001 , In: Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 64 , 5 , p. 4 1 p.
  34. Instability of myelin tubes under dehydration: Deswelling of layered cylindrical structures
    Chen, C. M. , Schmidt, C. F., Olmsted, P. D. & MacKintosh, F. C., 2001 Nov , In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64 , 5 I , p. 050903/1-050903/4 050903.
  35. Lattice model of transmembrane polypeptide folding
    Chen, C. M. , 2001 , In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 63 , 1 I , p. 109011-109014 4 p. , 010901.
  36. Monte Carlo simulations of polymer brushes
    Chen, C. M. & Fwu, Y. A., 2001 , In: Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 63 , 1
  37. Reply to “Comment on ‘Theory for the bending anisotropy of lipid membranes and tubule formation’ ”
    Chen, C. M. , 2001 , In: Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 63, 1

    38. 2000

  38. Dilution wave and negative-order crystallization kinetics of chain molecules
    Ungar, G., Mandal, P. K., Higgs, P. G., De Silva, D. S. M., Boda, E. & Chen, C. M. , 2000 Nov 13 , In: Physical Review Letters. 85 , 20 , p. 4397-4400 4 p.
  39. Theory for the bending rigidity of protein-coated lipid membranes
    Chen, C. M. , 2000 Jun 15 , In: Physica A: Statistical Mechanics and its Applications. 281 , 1 , p. 41-50 10 p. proteins 100% lipids 100% membranes 100% bending 100% layers 60%

    40. 1999

  40. Theory for the bending anisotropy of lipid membranes and tubule formation
    Chen, C. M. , 1999 , In: Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 59 , 5 , p. 6192-6195 4 p.

    41. 1998

  41. Monte-Carlo simulations of polymer crystallization in dilute solution
    Chen, C. M. & Higgs, P. G., 1998 Mar 8 , In: Journal of Chemical Physics. 108 , 10 , p. 4305-4314 10 p.

    42. 1997

  42. Theory of fission for two-component lipid vesicles
    Chen, C. M. , Higgs, P. G. & Mac Kintosh, F. C., 1997 Jan 1 , In: Physical Review Letters. 79 , 8 , p. 1579-1582 4 p.

    43. 1996

  43. Theory of modulated phases in lipid bilayers and liquid crystal films
    Chen, C. M. & MacKintosh, F. C., 1996 , In: Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 53 , 5 , p. 4933-4943 11 p.

    44. 1995

  44. Phase transitions and modulated phases in lipid bilayers
    Chen, C. M. , Lubensky, T. C. & MacKintosh, F. C., 1995 , In: Physical Review E. 51 , 1 , p. 504-513 10 p.
  45. Structural phase transitions in liquid-crystal films induced by an applied electric field.
    Chen, C. M. & Mackintosh, F. C., 1995 May 1 , In: Europhysics Letters. 30 , 4 , p. 215-220 6 p.
  46. Swelling Kinetics of Layered Structures: Triblock Copolymer Mesogels
    Chen, C. M. , Mackintosh, F. C. & Williams, D. R. M., 1995 Jul 1 , In: Langmuir. 11 , 7 , p. 2471-2475 5 p.

    47. 199p

  47. Higgs boson production via the Bjorken process e+e-→H0μ+μ- at high energy e+e- colliders
    Chen, C. M. J. , Chen, J. W. & Hwang, W. Y. P., 199pan>, In: Physical Review D. 50 , 7 , p. 4485-4490 6 p.

    48. 1993

  48. Relativistic cross sections of positron-impact ionization of hydrogenic ions
    Kuo, T. Y., Chen, C. M. J. , Hsu, S. W. & Huang, K. N., 1993 , In: Physical Review A. 48 , 1 , p. 357-363 7 p.

    49. 1992

  49. Discrepancy in total cross sections of positron-impact ionization of hydrogen
    Hsu, S. W., Kuo, T. Y., Chen, C. M. J. & Huang, K. N., 1992 Jul 20 , In: Physics Letters A. 167 , 3 , p. 277-279 3 p.